{"id":205751,"date":"2019-01-23T09:22:02","date_gmt":"2019-01-23T09:22:02","guid":{"rendered":"http:\/\/labs.iitgn.ac.in\/ccbl\/?page_id=205751"},"modified":"2025-11-10T14:33:56","modified_gmt":"2025-11-10T14:33:56","slug":"publications","status":"publish","type":"page","link":"https:\/\/labs.iitgn.ac.in\/ccbl\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"

[et_pb_section fb_built=”1″ fullwidth=”on” _builder_version=”4.16″ custom_padding=”0px|0px|0px|0px” global_colors_info=”{}”][et_pb_fullwidth_header title=”Sivapriya Kirubakaran – Cancer Chemical Biology Lab” subhead=”Indian Institute of Technology Gandhinagar” _builder_version=”4.16″ content_font=”|600|||||||” subhead_font=”Georgia|600|||||||” background_color=”rgba(255, 255, 255, 0)” background_image=”http:\/\/research.iitgn.ac.in\/ccbl\/wp-content\/uploads\/2018\/04\/1.jpg” locked=”off” global_colors_info=”{}” button_one_text_size__hover_enabled=”off” button_two_text_size__hover_enabled=”off” button_one_text_color__hover_enabled=”off” button_two_text_color__hover_enabled=”off” button_one_border_width__hover_enabled=”off” button_two_border_width__hover_enabled=”off” button_one_border_color__hover_enabled=”off” button_two_border_color__hover_enabled=”off” button_one_border_radius__hover_enabled=”off” button_two_border_radius__hover_enabled=”off” button_one_letter_spacing__hover_enabled=”off” button_two_letter_spacing__hover_enabled=”off” button_one_bg_color__hover_enabled=”off” button_two_bg_color__hover_enabled=”off”][\/et_pb_fullwidth_header][et_pb_fullwidth_menu menu_id=”7″ submenu_direction=”downwards” _builder_version=”4.16″ menu_font=”|700|||||||” menu_text_color=”#0047e0″ menu_font_size=”15px” text_orientation=”center” global_colors_info=”{}”] 
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Publications<\/strong><\/span><\/h1>\n

[\/et_pb_text][\/et_pb_column][\/et_pb_row][\/et_pb_section][et_pb_section fb_built=”1″ admin_label=”Project Section 01″ _builder_version=”4.21.0″ custom_margin=”0px|||” custom_padding=”0|0px|0|0px|false|false” border_color_right=”#ffba60″ border_width_left=”8vw” border_color_left=”#2f73bc” locked=”off” global_colors_info=”{}”][et_pb_row admin_label=”Project Area 01″ module_class=” et_pb_row_fullwidth” _builder_version=”4.16″ width=”89%” width_tablet=”80%” width_phone=”80%” width_last_edited=”on|desktop” max_width=”89%” max_width_tablet=”80%” max_width_phone=”80%” max_width_last_edited=”on|desktop” custom_margin=”|auto||76px||” custom_padding=”0px|0px|0|10px|false|false” make_fullwidth=”on” global_colors_info=”{}”][et_pb_column type=”4_4″ _builder_version=”4.16″ custom_padding=”|||” global_colors_info=”{}” custom_padding__hover=”|||”][et_pb_text _builder_version=”4.16″ text_font=”Trebuchet||||||||” text_text_color=”rgba(0,0,0,0.95)” text_font_size=”16px” text_line_height=”2em” text_orientation=”justified” animation_style=”fade” global_colors_info=”{}”]<\/p>\n

<\/strong><\/p>\n

2025<\/strong><\/p>\n

    \n
  1. Nagar, Prinsa Ranjit, Ankita Menon, Tejas Manjibhai Dhameliya, and Sivapriya Kirubakaran<\/strong>. “Novel synthetic molecules for ovarian cancer.” In Ovarian Cancer, pp. 281-302. Academic Press, 2026. https:\/\/doi.org\/10.1016\/B978-0-443-33536-5.00001-8<\/a>\u00a0<\/strong><\/li>\n
  2. Bhagwat, Pranav U., and Sivapriya Kirubakaran.<\/strong> “Development of quinazoline based ATR inhibitors as targeted therapeutics for ATM-deficient and ATM-proficient cancers.” Organic & Biomolecular Chemistry 23, no. 34 (2025): 7731-7741. https:\/\/doi.org\/10.1039\/D5OB00849B<\/a>\u00a0<\/strong><\/li>\n
  3. Dilip, Haritha, Shalini, Vijay Thiruvenkatam, and Sivapriya Kirubakaran.<\/strong> “IMPDH as a potential antibacterial drug target for microbial infections: A review on a decade of targeted therapy and its implications.” Drug Discovery Today (2025): 104505. <\/span>https:\/\/doi.org\/10.1016\/j.drudis.2025.104505<\/a>\u00a0<\/span><\/strong><\/li>\n
  4. Ghous, Faraz and Sivapriya Kirubakaran<\/strong>. “Developing new Pyrido [2, 3-d] pyrimidine-Based Small-Molecule as potent ATR Inhibitors.” Synlett (2025). \u00a010.1055\/a-2705-9462\u00a0<\/span><\/span><\/li>\n
  5. Puri, Sachin, Shalini<\/strong>, Kapil Juvale, and Sivapriya Kirubakaran<\/strong>. “Design and development of new Benzopyrazole derivatives as selective inhibitors of Helicobacter pylori IMPDH.” Asian Journal of Organic Chemistry (2025): e00584. https:\/\/doi.org\/10.1002\/ajoc.202500584<\/a>\u00a0<\/strong><\/li>\n
  6. Dilip, Haritha, Deepika Khasa<\/strong>, Ramya VK, Parvinder Kaur, Siva Shanmugam, Naveenkumar Chakenalli, Radhakrishanan Shandil, Shridhar Narayanan, Vijay Thiruvenkatam, and Sivapriya Kirubakaran<\/strong>. “Studies on developing a preclinical candidate to fight Helicobacter Pylori infection.” ACS Infectious Diseases 11, no. 8 (2025): 2367-2371. https:\/\/doi.org\/10.1021\/acsinfecdis.5c00383<\/a>\u00a0<\/strong><\/li>\n
  7. Priya, Bhanu, and Sivapriya Kirubakaran.<\/strong> “TLK1 as a therapeutic target in TMZ resistant glioblastoma using small molecule inhibitor.” Scientific Reports<\/em> 15, no. 1 (2025): 14691. https:\/\/doi.org\/10.1038\/s41598-025-86599-3<\/a>\u00a0<\/span><\/li>\n
  8. Dubey, Yogesh, Haritha Dilip, Sivapriya Kirubakaran<\/strong>, and Sriram Kanvah. “Fluorescent Polyamines for Efficient DNA Condensation and Cellular Uptake.” Small (2025): 2503144. https:\/\/doi.org\/10.1002\/smll.202503144<\/a>\u00a0<\/span><\/li>\n
  9. Johnson, Delna, Shivangi Sharma, Vijay Thiruvenkatam, and Sivapriya Kirubakaran.<\/strong> “Characterization of new non-ATP dependent inhibitors of TLK1 as potential molecules for treating prostate cancer.” Bioorganic Chemistry<\/em> 158 (2025): 108317. https:\/\/doi.org\/10.1016\/j.bioorg.2025.108317<\/a>\u00a0<\/span><\/li>\n
  10. Johnson, Delna, Madhulika Dixit, and Sivapriya Kirubakaran.<\/strong> “Biochemical and Structural Studies of Protein Tyrosine Phosphatase PTP\u2010PEST (PTPN12) in Search of Small Molecule Inhibitors.”\u00a0<\/span>Chemical Biology & Drug Design<\/i>\u00a0105, no. 2 (2025): e70058. https:\/\/doi.org\/10.1111\/cbdd.70058<\/a>\u00a0<\/span><\/li>\n
  11. Ghosh, Ahana, V. N. Prabhakar, Eleanora A. Reber, Helna Liston, Sivapriya Kirubakaran, Sreelakshmi KS, Umesh Talekar, Mukesh Bhardwaj, Abhay Vishwakarma, and Sharada Channarayapatna.<\/strong> “Does form entail function? Understanding pottery functionalities through absorbed residues within ceramics from the Harappan sites of Karanpura and Ropar in India.”\u00a0<\/span>Quaternary Environments and Humans<\/i>\u00a03, no. 1 (2025): 100050. https:\/\/doi.org\/10.1016\/j.qeh.2024.100050<\/a> <\/span>\u00a0<\/li>\n<\/ol>\n

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    2024<\/strong><\/p>\n

      \n
    1. Sirakanyan, Samvel N., Haritha Dilip, Athina Geronikaki, Domenico Spinelli, Sivapriya Kirubakaran, Anthi Petrou, Elmira K. Hakobyan et al.<\/strong> “In silico Design, Synthesis and Biological Evaluation of Novel Thieno [3, 2\u2010d] pyrimidine Derivatives for Cancer Therapy\u2013A Preliminary Study on the Inhibitory Potential towards ATR Kinase Domain and PIKK Family. “Chemistry & Biodiversity, <\/i>2024<\/strong>, 21, 3, e202302071. https:\/\/doi.org\/10.1002\/cbdv.202302071<\/a>\u00a0<\/span><\/li>\n
    2. Bhanu Priya, Delna Johnson, Gurudutt Dubey, Divita Suthar, Indracanti Prem Kumar, Vijay Thiruvenkatam, and Sivapriya Kirubakaran.<\/strong> “Temozolomide cocrystal forms with enhanced dissolution, stability and biological activity towards Glioblastoma.” J. Mol. Struct.<\/i>\u00a02024<\/strong>, 1313, 138751. https:\/\/doi.org\/10.1016\/j.molstruc.2024.138751<\/a>\u00a0<\/li>\n
    3. Dilip, Haritha, Dr. Vijay Thiruvenkatam, and Dr. Sivapriya Kirubakaran.<\/strong> “Studies on Methylpyrazole-Substituted Benzimidazoles to Target Helicobacter pylori Infection through Hp IMPDH Inhibition.”\u00a0ACS Infect. Dis.<\/i>\u00a02024<\/strong>. https:\/\/doi.org\/10.1021\/acsinfecdis.4c00228<\/a><\/li>\n
    4. Parwani, K.; Patel, F.; Bhagwat, P.; Dilip, H.; Patel, D.; Thiruvenkatam, V.; Mandal,\u00a0 P., Swertiamarin mitigates nephropathy in high-fat diet\/streptozotocin-induced diabetic rats by inhibiting the formation of advanced glycation end products. <\/span>Archives of Physiology and Biochemistry<\/span><\/i>, <\/span>2024<\/b>, 130 (<\/span>2<\/span><\/i>), 136\u201354. DOI: <\/span>10.1080\/13813455.2021.1987478<\/span><\/a><\/li>\n
    5. Priya, B.; Chhabria, D.; Dhongdi, J. M.; Kirubakaran, S. A novel approach to investigate the combinatorial effects of TLK1 (Tousled-like kinase 1) inhibitors for Glioblastoma Therapy. Bioorg. Chem.<\/em> 2024<\/strong>, 151, 107643. https:\/\/doi.org\/10.1016\/j.bioorg.2024.107643<\/a>\u00a0<\/li>\n<\/ol>\n

       <\/p>\n

      [\/et_pb_text][\/et_pb_column][\/et_pb_row][et_pb_row admin_label=”Project Area 01″ module_class=” et_pb_row_fullwidth” _builder_version=”4.16″ width=”89%” width_tablet=”80%” width_phone=”80%” width_last_edited=”on|desktop” max_width=”89%” max_width_tablet=”80%” max_width_phone=”80%” max_width_last_edited=”on|desktop” custom_padding=”0px|0px|0|8px|false|false” make_fullwidth=”on” global_colors_info=”{}”][et_pb_column type=”4_4″ _builder_version=”4.16″ custom_padding=”|||” global_colors_info=”{}” custom_padding__hover=”|||”][et_pb_text _builder_version=”4.16″ text_font=”Trebuchet||||||||” text_text_color=”rgba(0,0,0,0.95)” text_font_size=”16px” text_line_height=”2em” text_orientation=”justified” animation_style=”fade” global_colors_info=”{}”]<\/p>\n

      2023<\/strong><\/p>\n

        \n
      1. Priya, Bhanu; Dubey, Gurudutt; Kirubakaran, Sivapriya.<\/strong> Exploring SPK98 for the Selective Sensitization of ATM \u2013 or \u2013 P53 \u2013 Deficient Cancer Cells. ACS Omega<\/em> 2023<\/strong>, 8, 4954-4962. https:\/\/pubs.acs.org\/doi\/10.1021\/acsomega.2c07356<\/a>\u00a0<\/li>\n
      2. Johnson, Delna; Hussain, Javeena; Bhoir, Siddhant; Chandrasekharan, Vaishali; Sahrawat, Parul; Hans, Tanya; Khalil, Imtiaz; De Benedetti, Arrigo; Thiruvenkatam, Vijay; Kirubakaran, Sivapriya.<\/strong> Synthesis, kinetics, and cellular studies of new phenothiazine analogs as potent human-TLK inhibitors. Biomol. Chem<\/em>. 2023<\/strong>, 21, 1980-1991.\u00a0https:\/\/doi.org\/10.1039\/d2ob02191a<\/a><\/li>\n
      3. Shaik, Althaf; Bhagwat, Pranav; Palanisamy, Parimaladevi; Chhabria, Dimple; Dubey, Pankaj; Kirubakaran, Sivapriya; Thiruvenkatam, Vijay.<\/strong>\u00a0\u201cNovel pharmaceutical Co- crystals of Gefitinib: Synthesis, Dissolution, Cytotoxicity, and Theoretical Studies.\u201d CrystEnggComm<\/em>\u00a02023<\/strong>, 25, 2570-2581. https:\/\/doi.org\/10.1039\/D3CE00056G<\/a>\u00a0<\/li>\n
      4. Priya, Bhanu; Ravi, Srimadhavi; Kirubakaran, Sivapriya. Targeting ATM and ATR for Cancer Therapeutics. Drug Discovery Today<\/em> 2023<\/strong>, 28, 8, 103662. https:\/\/doi.org\/10.1016\/j.drudis.2023.103662<\/a>\u00a0<\/li>\n
      5. Geronikaki, Athina, Gurudutt Dubey, Anthi Petrou, and Sivapriya Kirubakaran.<\/strong> “Computer-aided drug design: an overview.”\u00a0<\/span>Cheminformatics, QSAR and Machine Learning Applications for Novel Drug Development, <\/i>2023<\/strong>, 39-68. https:\/\/doi.org\/10.1016\/B978-0-443-18638-7.00024-4<\/a><\/span><\/li>\n
      6. Delna Johnson<\/span>,\u00a0<\/span><\/span>Sivapriya Kirubakaran<\/span>,\u00a0<\/span><\/span>Vijay Thiruvenkatam; Abstract C154: Investigation of indole-based molecules as a new class of TLK1\u00a0inhibitors in prostate cancer therapy.\u00a0<\/span>Mol Cancer Ther<\/em>,\u00a01 December 2023; 22 (12_Supplement): C154.\u00a0<\/span>https:\/\/doi.org\/10.1158\/1535-7163.TARG-23-C154<\/a> <\/span><\/li>\n
      7. Kumari, Amita, Pranav Umesh Bhagwat, Dimple Chhabria, Sivapriya Kirubakaran, and Sushil K. Maurya.<\/strong> “Comparative Study of Secondary Metabolites of Camellia sinensis and Camellia japonica Flowers Growing in the Kangra Region of India and Their Cytotoxicity Evaluation.”\u00a0ACS Food Sci. Technol.<\/i> 2023<\/strong>, \u00a03, 9, 1484-1495. https:\/\/doi.org\/10.1021\/acsfoodscitech.3c00180<\/a> \u00a0<\/li>\n<\/ol>\n

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        \u00a02022<\/strong><\/p>\n

        1. Hussain, Javeena; Sahrawat, Parul; Dubey, Pankaj; Kirubakaran, Sivapriya<\/strong>\u00a0and\u00a0Thiruvenkatam, Vijay<\/strong>, \u201cExploring packing features of N-substituted acridone derivatives: synthesis and X-ray crystallography studies.\u201d Journal of Molecular Structure<\/em>, vol. 1248, Jan. 2022<\/strong>. DOI:\u00a010.1016\/j.molstruc.2021.131448<\/a>, .<\/p>\n

        2. Johnson, Delna; Hussain, Javeena; Bhoir, Siddhant; Sahsrawat, Parul; Hans, Tanya; Vaishali, C.; Thiruvenkatam, Vijay<\/strong>\u00a0and\u00a0Kirubakaran, Sivapriya<\/strong>, \u201cEvaluating the therapeutic viability of bacterially expressed human TLK1B-kinase domain for cancer drug design\u201d,\u00a0Research Square<\/em>, Research Square Company, Feb. 2022<\/strong>. DOI:\u00a010.21203\/rs.3.rs-1314176\/v1<\/a>.<\/p>\n

        3. Bajpai, Aman; Deepshikha; Chhabria, Dimple; Mishra, Tripti; Kirubakaran, Sivapriya and Basu, Sudipta. \u201cSmall molecules NSAID derivatives for impairing powerhouse in cancer cells,\u201d Bioorganic and Medicinal Chemistry<\/em>, vol.64, June 2022<\/strong>. https:\/\/doi.org\/10.1016\/j.bmc.2022.116759<\/a>\u00a0<\/p>\n

        4. Mikhaylo Frasinyuk, Chhabria, Dimple, Victor Kartsev, Dilip, Haritha, Samvel Sirakanyan, \u00a0Kirubakaran, Sivapriya, Athina Geronikaki, Domenico Spinelli D, \u201cBenzothiazole and Chromone derivatives as potential ATR kinase inhibitors and anticancer agents.\u201d Molecules<\/em> 2022<\/strong>, 27, 4637.\u00a0https:\/\/doi.org\/10.3390\/molecules2714463<\/a><\/p>\n

        5. Shinde, Sopan; Chhabria, Dimple; Ingle, Jaypalsing, Kirubakaran, Sivapriya, and Basu, Sudipta, \u201cSmall molecule induces mitochondria impairment in colon cancer cells.\u201d New J. Chem.<\/em> 2022<\/strong>, 46, 22117-22121. https:\/\/doi.org\/10.1039\/D2NJ03242B<\/a>\u00a0<\/p>\n

         <\/p>\n

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        2021<\/strong><\/p>\n

          \n
        1. Kirubakaran, Sivapriya<\/strong>; Sureshkumar, Devarajulu and Chandrasekaran, Srinivasan, \u201cTetrathiomolybdate and tetraselenotungstate as sulfur\/selenium transfer reagents: applications in the synthesis of new thio\/seleno sugars\u201d,\u00a0The Chemical Record,<\/em>\u00a0DOI:\u00a010.1002\/tcr.202100097<\/a>, Jun. 2021.<\/li>\n
        2. Ravi, Srimadhavi; Priya, Bhanu; Dubey, Pankaj; Thiruvenkatam, Vijay<\/strong>\u00a0and\u00a0Kirubakaran, Sivapriya<\/strong>, \u201cMolecular docking and molecular dynamics simulation studies of quinoline-3-carboxamide derivatives with DDR kinases\u2013selectivity studies towards ATM kinase\u201d,\u00a0Chemistry,<\/em>\u00a0DOI:\u00a010.3390\/chemistry3020036<\/a>, vol. 3, no. 2, pp. 511-524, Apr. 2021.<\/li>\n
        3. Bhoir, Siddhant; Hussain, Javeena<\/strong>\u00a0and\u00a0Kirubakaran, Sivapriya<\/strong>, \u201cTousled like kinase as a new drug target towards prostate cancer therapy\u201d, in\u00a0the 58thAnnual Convention of Chemists (ACC) of the Indian Chemical Society (ICS): International Conference on Recent Trands in Chemical Sciences Organic & Bio-Chemistry(RTCS-OBC 2021),<\/em>\u00a0Kolkata, IN, Dec. 22-24, 2021.<\/li>\n
        4. Dilip, Haritha; Thiruvenkatam, Vijay<\/strong>\u00a0and\u00a0Kirubakaran, Sivapriya<\/strong>, \u201cElucidation of the structural and functional role of key amino acids in helicobacter pylori IMPDH through point mutations\u201d, in\u00a0the 27th CRSI National Symposium in Chemistry<\/em>, Kolkata, IN, Sep. 27-30, 2021.<\/li>\n
        5. George, Johnson Delna J. K.; Thiruvenkatam, Vijay<\/strong>\u00a0and\u00a0Kirubakaran, Sivapriya<\/strong>, \u201cTLK1B: a new kinase to target for prostate cancer therapy\u201d, in\u00a0the 27th CRSI National Symposium in Chemistry<\/em>, Kolkata, IN, Sep. 27-30, 2021.<\/li>\n
        6. Priya, Bhanu<\/strong>\u00a0and\u00a0Kirubakaran, Sivapriya<\/strong>, \u201cEmploying SPK98 for selective sensitization of ATM or P53 deficient cancer cell\u201d, in\u00a0the 27th CRSI National Symposium in Chemistry<\/em>, Kolkata, IN, Sep. 27-30, 2021.<\/li>\n<\/ol>\n

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          2020<\/strong><\/p>\n

            \n
          1. Bhakuni, Rashmi; Shaik, Althaf; Priya, Bhanu<\/strong>\u00a0and\u00a0Kirubakaran, Sivapriya<\/strong>, \u201cCharacterization of SPK 98, a Torin2 analog, as ATR and mTOR dual kinase inhibitor\u201d,\u00a0Bioorganic & Medicinal Chemistry Letters<\/em>, DOI:\u00a010.1016\/j.bmcl.2020.127517<\/a>, vol. 30, no. 23, Sep. 2020.<\/li>\n
          2. Hussain, Javeena; Angira, Deekshi; Hans, Tanya; Dubey, Pankaj; Kirubakaran, Sivapriya<\/strong>\u00a0and\u00a0Thiruvenkatam, Vijay<\/strong>, \u201cSynthesis and characterization of a new class of phenothiazine molecules with 10H-substituted morpholine & piperidine derivatives: a structural insight\u201d,\u00a0Journal of Molecular Structure,<\/em>\u00a0DOI:\u00a010.1016\/j.molstruc.2020.128546<\/a>, vol. 1219, Jun. 2020.<\/li>\n
          3. Hussain, Javeena; Chhabria, Dimple<\/strong>\u00a0and\u00a0Kirubakaran, Sivapriya<\/strong>, \u201cDesign, synthesis and biological evaluation of new Myo-inositol derivatives as potential RAS inhibitors\u201d,\u00a0Bioorganic & Medicinal Chemistry Letters,<\/em>\u00a0DOI:\u00a010.1016\/j.bmcl.2020.127290<\/a>, vol. 30, no. 16, Aug. 2020.<\/li>\n
          4. Hussain, Javeena; Kirubakaran, Sivapriya<\/strong>\u00a0and\u00a0Ravi, Srimadhavi<\/strong>, \u201cThe endeavours in RAS inhibition the past, present, and future\u201d,\u00a0Current Topics in Medicinal Chemistry,<\/em>\u00a0DOI:\u00a010.2174\/1568026620666200903163044<\/a>, vol. 20, no. 29, pp. 2708-2722, Sep. 2020.<\/li>\n
          5. Ravi, Srimadhavi; Barui, Sugata; Kirubakaran, Sivapriya; Duhan, Parul<\/strong>\u00a0and\u00a0Bhowmik, Kaushik<\/strong>, \u201cSynthesis and characterization of quinoline-3-carboxamide derivatives as inhibitors of the ATM kinase\u201d,\u00a0Current Topics in Medicinal Chemistry,<\/em>\u00a0DOI:\u00a010.2174\/1568026620666200731174216<\/a>, vol. 20, no. 23, pp. 2070-2079, Jul. 2020.<\/li>\n
          6. Shaik, Althaf<\/strong>\u00a0and\u00a0Kirubakaran, Sivapriya<\/strong>, \u201cEvolution of PIKK family kinase inhibitors: a new age cancer therapeutics\u201d,\u00a0Frontiers in Bioscience, Landmark Edition,<\/em>\u00a0DOI:\u00a010.2741\/4866<\/a>, vol. 25, no. 8, pp. 1510-1537, Mar. 2020.<\/li>\n
          7. Singh, Neeru; Bhakuni, Rashmi; Chhabria, Dimple<\/strong>\u00a0and\u00a0Kirubakaran, Sivapriya<\/strong>, \u201cMDC1 depletion promotes cisplatin induced cell death in cervical cancer cells\u201d,\u00a0BMC Research Notes,<\/em>\u00a0DOI:\u00a010.1186\/s13104-020-04996-5<\/a>, vol. 13, no. 1, Mar. 2020.<\/li>\n
          8. Singh, Vibha\u00a0#<\/sup>;\u00a0Bhoir, Siddhant<\/strong>\u00a0#<\/sup>; Chikhale, Rupesh V.\u00a0$<\/sup>;\u00a0Hussain, Javeena<\/strong>\u00a0$<\/sup>; Dwyer, Donard; Bryce, Richard A.\u00a0*<\/sup>;\u00a0Kirubakaran, Sivapriya<\/strong>\u00a0*<\/sup>\u00a0and De Benedetti, Arrigo *, \u201cGeneration of phenothiazine with potent anti-TLK1 activity for prostate cancer therapy\u201d,\u00a0iScience,<\/em>\u00a0DOI:\u00a010.1016\/j.isci.2020.101474<\/a>, vol. 23, no. 9, Aug. 2020. (*corresponding authors # equal contribution $ equal contribution).<\/li>\n
          9. Shaik, Althaf; Natarajan, Nalini; Kirubakaran, Sivapriya<\/strong>\u00a0and\u00a0Thiruvenkatam, Vijay<\/strong>, \u201cVirtual screening of FDA approved drugs against Nsp15 endoribonuclease from SARS CoV-2\u201d,\u00a0ChemRxiv.org<\/em>, DOI:\u00a010.26434\/chemrxiv.13265519.v1\u00a0<\/a>, Nov. 2020.<\/li>\n
          10. Srimadhavi, Ravi; Priya, Bhanu<\/strong>\u00a0and\u00a0Sivapriya, Kirubakaran<\/strong>, \u201cDesign and characterization of Quinoline-3-Carboxamides as selective inhibitors of ATM kinase for cancer therapeutics\u201d, in\u00a0the 57th Annual Convention of Chemists & International Conference on Recent Trends in Chemical Sciences (RTCS 2020),<\/em>\u00a0Indian Chemical Society (ICS), Kolkata, IN, Dec. 26-29, 2020. (Best Presentation Award).<\/li>\n
          11. Bhoir, Siddhant; Singh, Vibha; Chikhale, Rupesh; Hussain, Javeena<\/strong>; Bryce, Richard; De Benedetti, Arrigo and\u00a0Kirubakaran, Sivapriya<\/strong>, \u201cTargeting prostate cancer: the tousled way\u201d, in\u00a0the 2020 Meeting of DNA Damage, Mutation and Cancer Gordon Research Conference<\/em>, Ventura, US, Mar. 1-6, 2020.<\/li>\n
          12. Rimjhim; Shaik, Althaf<\/strong>\u00a0and\u00a0Kirubakaran, Sivapriya<\/strong>, \u201cDevelopment of inosine-5-monophosphate dehydrogenase (IMPDH) inhibitors against helicobacter pylori infection\u201d, in\u00a0the 26th Indian Society for Chemists and Biologists Conference (ISCBC)-Nirma Institute of Pharmacy International Conference (NIPiCON) 2020,<\/em>\u00a0Nirma University, Ahmedabad, IN, Jan. 22-24, 2020.<\/li>\n
          13. Sahrawat, Parul; Hussain, Javeena; C. Vaishali<\/strong>\u00a0and\u00a0Kirubakaran, Sivapriya<\/strong>, \u201cDesign, synthesis and biological studies of small molecule inhibitors targeting Tousled-like kinase(TLK1\/1B) as anti-cancer agent\u201d, in\u00a0the 26th Indian Society for Chemists and Biologists Conference (ISCBC)-Nirma Institute of Pharmacy International Conference (NIPiCON) 2020,<\/em>\u00a0Nirma University, Ahmedabad, IN, Jan. 22-24, 2020.<\/li>\n<\/ol>\n

            [\/et_pb_text][\/et_pb_column][\/et_pb_row][et_pb_row admin_label=”Project Area 01″ module_class=” et_pb_row_fullwidth” _builder_version=”4.16″ width=”89%” width_tablet=”80%” width_phone=”80%” width_last_edited=”on|desktop” max_width=”89%” max_width_tablet=”80%” max_width_phone=”80%” max_width_last_edited=”on|desktop” custom_padding=”0px|0px|0|0px|false|false” make_fullwidth=”on” global_colors_info=”{}”][et_pb_column type=”4_4″ _builder_version=”4.16″ custom_padding=”|||” global_colors_info=”{}” custom_padding__hover=”|||”][et_pb_text _builder_version=”4.16″ text_font=”Trebuchet||||||||” text_font_size=”16px” text_line_height=”2em” animation_style=”fade” global_colors_info=”{}”]2019<\/strong><\/p>\n

              \n
            1. Bhoir, S.; Hussain, J.; Singh, V.; Chikhale, R.; Bryce, R.; Kirubakaran, S.;<\/strong> DeBenedetti, A., Abstract 1264: Design, synthesis and biological evaluation of new phenothiazine derivatives as potential Tousled-like kinase 1 inhibitors in prostate cancer treatment. Cancer research <\/em>2019,<\/strong> 79<\/em> (13 Supplement), 1264.<\/li>\n
            2. Jangra, S.; Purushothaman, G.; Juvale, K.; Ravi, S.; Menon, A.; Thiruvenkatam, V.; Kirubakaran, S.,<\/strong> Synthesis and In Vitro Enzymatic Studies of New 3-Aryldiazenyl Indoles as Promising Helicobacter pylori IMPDH Inhibitors. Current Topics in Medicinal Chemistry <\/em>2019,<\/strong> 19<\/em> (5), 376-382.<\/li>\n
            3. Juvale, K.; Purushothaman, G.; Singh, V.; Shaik, A.; Ravi, S.; Thiruvenkatam, V.; Kirubakaran, S.<\/strong>, Identification of selective inhibitors of Helicobacter pylori IMPDH as a targeted therapy for the infection. Scientific Reports <\/em>2019,<\/strong> 9<\/em> (1), 190.<\/li>\n
            4. P. Shah, C.; Purushothaman, G.; Thiruvenkatam, V.; Kirubakaran, S.<\/strong>; Juvale, K.; Kharkar, P., Design, synthesis and biological evaluation of Helicobacter pylori inosine 5\u2032-monophosphate dehydrogenase (HpIMPDH) inhibitors. Further optimization of selectivity towards HpIMPDH over human IMPDH2. Bioorganic Chemistry <\/em>2019,<\/strong> 87<\/em>.<\/li>\n
            5. Althaf, S.; Harshit, K. A.; Rashmi, B.; Sivapriya, K.<\/strong>, Novel Pyrazolo[4, 3-c]Quinolin-3-One Derivatives as PDE5A Inhibitors. Current Topics in Medicinal Chemistry <\/em>2019,<\/strong> 19<\/em> (4), 305-315.<\/li>\n
            6. Juvale, K.*; Shaik, A. *; Kirubakaran, S.,<\/strong> Inhibitors of inosine 5\u2032-monophosphate dehydrogenase as emerging new generation antimicrobial agents. MedChemComm <\/em>2019,<\/strong> 10<\/em> (8), 1290-1301.( * Equal\u00a0 authors)<\/li>\n<\/ol>\n

               
              \n[\/et_pb_text][\/et_pb_column][\/et_pb_row][\/et_pb_section][et_pb_section fb_built=”1″ admin_label=”Project Section 01″ _builder_version=”4.16″ custom_padding=”0|0px|0|0px|false|false” border_color_all=”#0047e0″ border_color_right=”#ffba60″ border_width_left=”8vw” border_color_left=”#2cb2b0″ locked=”off” global_colors_info=”{}”][et_pb_row admin_label=”Project Area 01″ module_class=” et_pb_row_fullwidth” _builder_version=”4.16″ width=”89%” width_tablet=”80%” width_phone=”80%” width_last_edited=”on|desktop” max_width=”89%” max_width_tablet=”80%” max_width_phone=”80%” max_width_last_edited=”on|desktop” make_fullwidth=”on” global_colors_info=”{}”][et_pb_column type=”4_4″ _builder_version=”4.16″ custom_padding=”|||” global_colors_info=”{}” custom_padding__hover=”|||”][et_pb_text _builder_version=”4.16″ text_font=”||||||||” text_font_size=”16px” text_line_height=”2em” animation_style=”fade” global_colors_info=”{}”]2018<\/strong><\/p>\n

                \n
              1. Bhakuni, R.; Shaik, A.; Kirubakaran, S.,<\/strong> Evaluation of MBP tagged-hATR kinase domain catalytic activity with p53 Ser-15 phosphorylation. Biochemistry<\/em>, 2018<\/strong>,\u00a0 57<\/em>,<\/em>\u00a047,\u00a06592-6603.<\/li>\n
              2. Shaik, A.; Bhakuni, R.; Kirubakaran, S.,<\/strong> Design, Synthesis, and Docking Studies of New Torin2 Analogs as Potential ATR\/mTOR Kinase Inhibitors. Molecules <\/em>2018,<\/strong> 23<\/em> (5), 992.<\/li>\n
              3. Bhoir, S.; Shaik, A.; Thiruvenkatam, V. *; Kirubakaran, S. <\/strong>*,<\/strong> High yield bacterial expression, purification and characterization of bioactive Human Tousled-like Kinase 1B involved in cancer. Scientific Reports <\/em>2018,<\/strong> 8<\/em> (1), 4796. ( * Equal Corresponding authors).<\/li>\n
              4. Singh, N.; Bhakuni, R.; Kirubakaran, S.,<\/strong> Abstract 772: High MDC1 expression in cervical cancer cells can affect the chemo- and radiotherapeutic response as its depletion leads to increased cell death. Cancer Research <\/em>2018,<\/strong> 78<\/em> (13 Supplement), 772.<\/li>\n<\/ol>\n

                [\/et_pb_text][\/et_pb_column][\/et_pb_row][\/et_pb_section][et_pb_section fb_built=”1″ admin_label=”Project Section 01″ _builder_version=”4.16″ custom_padding=”0|0px|0|0px|false|false” border_color_right=”#ffba60″ border_width_left=”8vw” border_color_left=”#2baf81″ locked=”off” global_colors_info=”{}”][et_pb_row admin_label=”Project Area 01″ module_class=” et_pb_row_fullwidth” _builder_version=”4.16″ width=”89%” width_tablet=”80%” width_phone=”80%” width_last_edited=”on|desktop” max_width=”89%” max_width_tablet=”80%” max_width_phone=”80%” max_width_last_edited=”on|desktop” make_fullwidth=”on” global_colors_info=”{}”][et_pb_column type=”4_4″ _builder_version=”4.16″ custom_padding=”|||” global_colors_info=”{}” custom_padding__hover=”|||”][et_pb_text _builder_version=”4.16″ text_font=”||||||||” text_font_size=”16px” text_line_height=”2em” animation_style=”fade” global_colors_info=”{}”]2017<\/strong><\/p>\n

                  \n
                1. Palanisamy, P.; Shaik, A.; Kirubakaran, S.;<\/strong> Thiruvenkatam, V., Effect of co-crystallization on physico-chemical properties of gefitinib. Acta Crystallographica Section A <\/em>2017,<\/strong> 73<\/em> (a2), C725.<\/li>\n
                2. Shaik, A.; Kirubakaran, S.;<\/strong> Thiruvenkatam, V., Crystal structure and Hirshfeld surface analysis of ethyl 5-phenylisoxazole-3-carboxylate. Acta Crystallographica Section E <\/em>2017,<\/strong> 73<\/em> (4), 531-534.<\/li>\n
                3. Kirubakaran, S.;<\/strong> Thiruvenkatam, V. T.; Shaik, A., Abstract 3235: Development of potent and selective inhibitors for ATR: An adjuvant for DNA damage based chemotherapeutics. Cancer Research <\/em>2017,<\/strong> 77<\/em> (13 Supplement), 3235-3235.<\/li>\n
                4. Purushothaman, G.*; Juvale, K.*; Kirubakaran<\/strong>, S.; Vemula, P. K.; Thiruvenkatam, V., Water-mediated intermolecular interactions in 1,2-O-cyclohexylidene-myo-inositol: a quantitative analysis. Acta crystallographica. Section C, Structural chemistry <\/em>2017,<\/strong> 73<\/em> (Pt 1), 20-27 ( * Equal first authors)
                  \n<\/strong><\/li>\n<\/ol>\n

                  [\/et_pb_text][\/et_pb_column][\/et_pb_row][\/et_pb_section][et_pb_section fb_built=”1″ admin_label=”Project Section 01″ _builder_version=”4.16″ background_color=”#f7f7f7″ custom_padding=”0|0px|0|0px|false|false” border_color_right=”#ffba60″ border_width_left=”8vw” border_color_left=”rgba(71,188,141,0.6)” locked=”off” global_colors_info=”{}”][et_pb_row admin_label=”Project Area 01″ module_class=” et_pb_row_fullwidth” _builder_version=”4.16″ width=”89%” width_tablet=”80%” width_phone=”80%” width_last_edited=”on|desktop” max_width=”89%” max_width_tablet=”80%” max_width_phone=”80%” max_width_last_edited=”on|desktop” make_fullwidth=”on” global_colors_info=”{}”][et_pb_column type=”4_4″ _builder_version=”4.16″ custom_padding=”|||” global_colors_info=”{}” custom_padding__hover=”|||”][et_pb_text _builder_version=”4.16″ text_font=”||||||||” text_font_size=”16px” text_line_height=”2em” animation_style=”fade” global_colors_info=”{}”]2013-2010<\/strong><\/p>\n

                    \n
                  1. Liu, Q.; Xu, C.; Kirubakaran, S.;<\/strong> Zhang, X.; Hur, W.; Liu, Y.; Kwiatkowski, N. P.; Wang, J.; Westover, K. D.; Gao, P.; Ercan, D.; Niepel, M.; Thoreen, C. C.; Kang, S. A.; Patricelli, M. P.; Wang, Y.; Tupper, T.; Altabef, A.; Kawamura, H.; Held, K. D.; Chou, D. M.; Elledge, S. J.; Janne, P. A.; Wong, K. K.; Sabatini, D. M.; Gray, N. S., Characterization of Torin2, an ATP-competitive inhibitor of mTOR, ATM, and ATR. Cancer Res <\/em>2013,<\/strong> 73<\/em> (8), 2574-86.<\/li>\n
                  2. Liu, Q.; Kirubakaran, S.;<\/strong> Hur, W.; Niepel, M.; Westover, K.; Thoreen, C. C.; Wang, J.; Ni, J.; Patricelli, M. P.; Vogel, K.; Riddle, S.; Waller, D. L.; Traynor, R.; Sanda, T.; Zhao, Z.; Kang, S. A.; Zhao, J.; Look, A. T.; Sorger, P. K.; Sabatini, D. M.; Gray, N. S., Kinome-wide selectivity profiling of ATP-competitive mammalian target of rapamycin (mTOR) inhibitors and characterization of their binding kinetics. The Journal of biological chemistry <\/em>2012,<\/strong> 287<\/em> (13), 9742-52.<\/li>\n
                  3. Kirubakaran, S.;<\/strong> Gorla, S. K.; Sharling, L.; Zhang, M.; Liu, X.; Ray, S. S.; Macpherson, I. S.; Striepen, B.; Hedstrom, L.; Cuny, G. D., Structure-activity relationship study of selective benzimidazole-based inhibitors of Cryptosporidium parvum IMPDH. Bioorg Med Chem Lett <\/em>2012,<\/strong> 22<\/em> (5), 1985-8.<\/li>\n
                  4. Macpherson, I. S.; Kirubakaran, S.;<\/strong> Gorla, S. K.; Riera, T. V.; D’Aquino, J. A.; Zhang, M.; Cuny, G. D.; Hedstrom, L., The structural basis of Cryptosporidium-specific IMP dehydrogenase inhibitor selectivity. Journal of the American Chemical Society <\/em>2010,<\/strong> 132<\/em> (4), 1230-1.<\/li>\n<\/ol>\n

                    [\/et_pb_text][\/et_pb_column][\/et_pb_row][\/et_pb_section][et_pb_section fb_built=”1″ admin_label=”Project Section 01″ _builder_version=”4.16″ background_color=”#f7f7f7″ custom_padding=”1px|0px|54px|0px|false|false” border_color_right=”#ffba60″ border_width_left=”8vw” border_color_left=”rgba(71,188,141,0.6)” locked=”off” global_colors_info=”{}”][et_pb_row admin_label=”Project Area 01″ module_class=” et_pb_row_fullwidth” _builder_version=”4.16″ width=”89%” width_tablet=”80%” width_phone=”80%” width_last_edited=”on|desktop” max_width=”89%” max_width_tablet=”80%” max_width_phone=”80%” max_width_last_edited=”on|desktop” make_fullwidth=”on” global_colors_info=”{}”][et_pb_column type=”4_4″ _builder_version=”4.16″ custom_padding=”|||” global_colors_info=”{}” custom_padding__hover=”|||”][et_pb_text _builder_version=”4.16″ text_font=”||||||||” text_font_size=”16px” text_line_height=”2em” animation_style=”fade” global_colors_info=”{}”]2009-2006<\/strong><\/p>\n

                      \n
                    1. Maurya, S. K.; Gollapalli, D. R.; Kirubakaran, S.;<\/strong> Zhang, M.; Johnson, C. R.; Benjamin, N. N.; Hedstrom, L.; Cuny, G. D., Triazole inhibitors of Cryptosporidium parvum inosine 5′-monophosphate dehydrogenase. Journal of medicinal chemistry <\/em>2009,<\/strong> 52<\/em> (15), 4623-4630.
                      \n<\/strong><\/li>\n
                    2. Sivapriya, K.;<\/strong> Suguna, P.; Chandrasekaran, S., Novel cyclic tetraselenides of mannose: synthesis and mechanistic studies. Tetrahedron Letters <\/em>2007,<\/strong> 48<\/em> (12), 2091-2095.
                      \n<\/strong><\/li>\n
                    3. Sivapriya, K.;<\/strong> Suguna, P.; Shubashree, S.; Sridhar, P. R.; Chandrasekaran, S., Novel chalcogenides of thymidine and uridine: synthesis, properties and applications. Carbohydrate research <\/em>2007,<\/strong> 342<\/em> (9), 1151-8.<\/li>\n
                    4. Sivapriya, K.;<\/strong> Hariharaputran, S.; Suhas, V. L.; Chandra, N.; Chandrasekaran, S., Conformationally locked thiosugars as potent alpha-mannosidase inhibitors: synthesis, biochemical and docking studies. Bioorganic & medicinal chemistry <\/em>2007,<\/strong> 15<\/em> (17), 5659-65.
                      \n<\/strong><\/li>\n
                    5. Sivapriya, K.;<\/strong> Suguna, P.; Banerjee, A.; Saravanan, V.; Rao, D. N.; Chandrasekaran, S., Facile one-pot synthesis of thio and selenourea derivatives: a new class of potent urease inhibitors. Bioorg Med Chem Lett <\/em>2007,<\/strong> 17<\/em> (22), 6387-91.
                      \n<\/strong><\/li>\n
                    6. Mitra, A.; Sivapriya, K.;<\/strong> Kumar, A., Experimental implementation of a three qubit quantum game with corrupt source using nuclear magnetic resonance quantum information processor. Journal of magnetic resonance (San Diego, Calif. : 1997) <\/em>2007,<\/strong> 187<\/em> (2), 306-13.
                      \n<\/strong><\/li>\n
                    7. Sivapriya, K.;<\/strong> Chandrasekaran, S., New conformationally locked thioderivatives of mannose: synthesis, applications, and mechanistic studies. Carbohydrate research <\/em>2006,<\/strong> 341<\/em> (13), 2204-10.
                      \n<\/strong><\/li>\n
                    8. Chockalingam, E.; Sivapriya, K.;<\/strong> Subramanian, S.; Chandrasekaran, S., Rice husk filtrate as a nutrient medium for the growth of Desulfotomaculum nigrificans: characterisation and sulfate reduction studies. Bioresource technology <\/em>2005,<\/strong> 96<\/em> (17), 1880-8.
                      \n<\/strong><\/li>\n
                    9. Sivapriya, K.;<\/strong> Chandrasekaran, S., Metathesis: A \u201cChange-Your-Partners\u201d dance. Resonance <\/em>2006,<\/strong> 11<\/em> (4), 26-32 (Invited Article)<\/strong><\/li>\n<\/ol>\n

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                      IIT Gandhinagar<\/span><\/strong><\/p>\n

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                        Publications 2025 Nagar, Prinsa Ranjit, Ankita Menon, Tejas Manjibhai Dhameliya, and Sivapriya Kirubakaran. “Novel synthetic molecules for ovarian cancer.” In Ovarian Cancer, pp. 281-302. Academic Press, 2026. https:\/\/doi.org\/10.1016\/B978-0-443-33536-5.00001-8\u00a0 Bhagwat, Pranav U., and Sivapriya Kirubakaran. “Development of quinazoline based ATR inhibitors as targeted therapeutics for ATM-deficient and ATM-proficient cancers.” Organic & Biomolecular Chemistry 23, no. […]<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"page-template-blank.php","meta":{"_et_pb_use_builder":"on","_et_pb_old_content":"","_et_gb_content_width":"","footnotes":""},"class_list":["post-205751","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/labs.iitgn.ac.in\/ccbl\/wp-json\/wp\/v2\/pages\/205751","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/labs.iitgn.ac.in\/ccbl\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/labs.iitgn.ac.in\/ccbl\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/labs.iitgn.ac.in\/ccbl\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/labs.iitgn.ac.in\/ccbl\/wp-json\/wp\/v2\/comments?post=205751"}],"version-history":[{"count":62,"href":"https:\/\/labs.iitgn.ac.in\/ccbl\/wp-json\/wp\/v2\/pages\/205751\/revisions"}],"predecessor-version":[{"id":206796,"href":"https:\/\/labs.iitgn.ac.in\/ccbl\/wp-json\/wp\/v2\/pages\/205751\/revisions\/206796"}],"wp:attachment":[{"href":"https:\/\/labs.iitgn.ac.in\/ccbl\/wp-json\/wp\/v2\/media?parent=205751"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}